Not from what I've heard. It was taken down due to an issue Videolan had with a clause in Apple's EULA. The GPL states anyone can copy and install any of their work to as many machine as they please, whereas Apple only allows for an app to be installed on X amount of devices per account. They didn't like it, and didn't expect Apple to change it to account for GPL licensed apps, so they yanked it from the App Store.
That was the interpretation of one of the copyright holders, which is why he requested that the app should be removed. Whether his interpretation is correct or not is undecided. But as a copyright holder requested it to be removed, Apple did so.
My interpretation is that if your app has its own license, then anybody downloading it has the rights given by your license (for example GPL), PLUS the rights given to the user by Apple's store license: If you submit an app, then you agree that the users have all the rights that Apple's store license gives them (even if that is more rights than your own license), but your own license isn't affected by that and still valid.