Are you currently paying fees to use your debit/cc card?
Didn't think so.
It's the merchant paying the fees for the convienience of accepting debit/cc cards.
Ever heard of Square? That's just one example.
The merchant usually passes those fees to the customer, for example credit pricing being higher than debit at gas stations. People just accept it, been that way forever.
Apple pay is not going to cause a revolt by consumers, they'll just eat it like they do with every other fee if they want to use it.