Why do you have to use stock gpu first?
First step to install OCLP macOS on these iMacs with replacement metal GPU is to get starting iMac to latest firmware. Best way is to start with original everything in iMac and install High Sierra. Sometimes I get iMac with HDD wiped so no idea what macOS is previously ran and what firmware level on the logic board. So I typically just boot El Capitan (via external USB SATA SSD) guessing the iMac was surely upgaded to >= El Capitan in the past and install High Sierra. Maybe there are other safe paths but this is the safest I know.
If get a broken iMac such as failed GPU, then this process would be harder. Not sure vBIOS flashed Kepler will boot in El Capitan to do the High Sierra upgrade.
Does this mean I must put the old graphics card back in and update to high sierra? I am having trouble getting the mac to boot into el capitan
I booted El Capitan on my 12,2 + vBIOS flashed K2000M. I guess El Capitan was released (9/30/2015) after iMacs with Kepler GPU (2013 iMacs has Kepler GPU) so El Capitan has Kepler drivers. I did lose brightness control. So you can try this to install HS. Or I suppose if you built an USB HS installer, can also try that with the vBIOS flashed Kepler. Obviously save a bunch of time if can skip reinstalling the original GPU.
Here is how I booted El Capitan bypassing OC EFI boot picker. The picture shows an external USB connected SATA SSD that contains several partitions (El Capitan, High Sierra, Catalina) I use this SSD for various installation efforts. For example, boot El Cap, install HS for these iMacs to update logic board firmware before metal GPU upgrade + OCLP newer macOS. Note I select El Capitan partition directly. This bypasses OC boot picker (EFI boot / left most icon)
Also always used a wired Apple keyboard to make sure you can use option key. When booting different macOSes and OCLP macOSes and OC EFI boot picker. I just avoid the question "is bluetooth connected?". OC EFI boot picker for example can't talk to BT Apple keyboard. My picture shows an Apple rechargeable BT keyboard with a lightning cord connected to iMac's USB. Basically becomes a USB wired Apple keyboard.

With El Capitan booted, here is my System Info. Do note the iMac 12,2 already went through HS install to update logic board firmware followed by OCLP Sequoia install.

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