They toss in the current system DVD and the iLife '08 Install DVD. If it doesn't arrive in your box you simply phone Applecare and they send them right out free of charge. No problem. You neglected to phone right away and demand satisfaction in a polite way.
Store still down - education and/or refurb paths.
You got lucky/the AppleCare rep you got was nice/they have an unwritten policy because they're nice guys. You're not entitled to software that didn't come with the machine originally. Now that the store is up, I checked:
What's in
the Box
* - Refurbished Mac mini
* - Apple Remote
* - DVI to VGA adapter
* - Power cord
* - Install/restore DVDs
* - Printed and electronic documentation
Software
Mac OS X v10.4 Tiger
The world's most advanced operating system including these system applications:
* - Address Book
* - DVD Player
* - iCal
* - iChat AV
* - Preview
* - Safari
* - Xcode
Applications
Mac mini also comes with the following applications:
* - iLife '06
* - Front Row
* - Front Row
* - Photo Booth
* - iWork '06 30-day trial
* - Microsoft Office 2004 for Mac 30-day Test Drive
Note: Other software may or may not be included (pre-installed or on CD's/DVD's) with refurbished products, subject to availability.
Sorry, $1149. Your post actually made me consider getting an iMac for the first time in many years, but is it me, or is apple starting to cut the edu discount quite a bit?
Ya, you trimmed out the "if" part of my comment.