Why not, are mac users unable to type? Or copy/paste text?
That said, the option to disable system integrity protection is placed in the recovery environment so that it is more difficult (ideally impossible) for malware to disable it from within the running OS.
Apple haven't put it there to be awkward, they've intentionally written El Capitan so that once the OS is booted, the system integrity protection can't be disabled from within the running OS - for protection reasons. *
Enabling you to tweak it with the terminal would mean that other processes could potentially turn it off as well. Which defeats the purpose of having it. If you need to turn it off, boot into recovery and turn it off. But unless you REALLY need to, you're better off leaving it ON to protect the operating system from tampering by malware - as an additional layer of security.
edit:
* this is the same way secure levels work in FreeBSD, and given OS X shares a bunch of code and ideas with FreeBSD, it would not surprise me if this code has been ported as well. Basically files can have flags set on them which makes them read-only once the system has been configured for a higher security level than 0, and the security level can only be increased once the OS has been loaded.