Background: I just installed a new HDD in my MBP, and decided to start OSX from scratch. I never had this problem in my last setup. Installed itunes, resync'd my ipad. Now whenever I sync my ipad, any newly installed apps get uninstalled by itunes. I've googled, but there are so many threads discussing hundreds of different reasons why this happens, but no fixes. I just did a straight backup only, no sync. I looked in the apps tab, and the apps itunes just uninstalled in the last sync are not listed. It's about 10 apps. I've reinstalled. So how do I sync now, without deleting these apps??!