Whoops. Wrong thread. Anyhoo, regarding your inquiry, any app that messes with the default folder setup will mess up the look/view in iTunes. Infinifolder/FolderEnhancer and, I think, Categories, will mess how your folders look in iTunes whenever you try to sync. As such, you won't be able to categorize your icons through iTunes anymore and you'll have to do it manually on your phone. It is a PITA, yes, I've had to do it as well. Just part of the process I guess. If you have a lot of apps and need to get them into folders, I'd suggest you download MultiIconMover from Cydia as this will make the reorganization of your folders A LOT easier.