iFixit has already done a teardown on the new 15" MacBook Pro. Looking at the pictures I can see a few changes from the current MacBooks that would impact the 13" design.
First, both the Intel System Hub and the new Thunderbolt controller have small,
passive heatsinks. However, neither is connected to the heat pipes that are used to cool the CPU and discrete GPU so I would still consider this to be a TWO heatsink design (same as the previous generation 15"/17" MacBook Pros and similar to the baseline 13" MacBook Pro I used for this analysis). So, no real change in the required space.
Also, I just realized that I omitted one set of chips that would be required to support a discrete GPU, that being the dedicated graphics memory for the GPU. Yes, a big oversight.
However, when looking at the current 15" MacBook Pro design you can see that Apple has mounted the graphics memory to the bottomside (or backside) of the motherboard and if you look at the pictures from the mid-2009, 13" MacBook Pro you can see that the backside of the motherboard has quite a bit of what looks to be empty space. So, it seems reasonable that Apple could also use that same space for any graphics memory that would be required for a 13" design that had a discrete GPU. So, I'm also calling this a non-issue (fortunate for my sake).
We'll have to wait to see what the inside of the new 13" MacBook Pro will look like, but I'm expecting one big difference that will highlight the changes that the Sandy Bridge architecture brings to the new design. It should have only one active heatsink, down from the two that are used in the baseline Core 2 Duo design. As previously noted, that means we have "room" for a second heatsink for a dedicated GPU (it would basically go into the same space occupied by the NVIDIA 9400M/320M in the previous 13" designs).