Thanks,
I can't seem to find any user guides on the handbrake forum... could you link me?
I would have to throw in, that it depends on what you'll be viewing on, and what you'll be using to play them.
If you are ripping them to watch on an AppleTV, then there are specific things that must be set for ATV to recognize it, and you'll probably wnat to do 2 pass encoding, with a larger end size file for higher quality video....
If you are planning on watching them on an iPhone, you may not want as much quality, because well, it's a 4" screen..., but again, you need certain codecs/containers for iphone to recognize it.
If you are going to connect your mac to a 52" High Def TV, then you'll definitely want to use a codec that allows decent compression with minimal loss.
Look into your needs, what you are viewing on, avaiilable storage capacity, and then monkey with the HB settings. You can save your own presets after you've set them, so that you don't have to reset them each time you start HB.
Best,
Brian