I have gone through a few OS upgrades on my iphone and then JBing the phone with no problem. The problem that I always have is getting my Cydia apps back on the phone. For example, I had a JB iphone 4 running iOS 4.01. And then when the JB for 4.1 came out I used Pwnage to upgrade to 4.1 JB. While my appstore apps come back, my cydia apps do not. Here's the procedure I used, please help. While still on 4.01 JB, I use PkgBackup to backup the apps. I then sync with itunes. I also right click on the iphone in Devices in itunes and backup the device again (just to be sure). I then ran Pwnage successfully to get to 4.1 JB. When itunes asks if this is a new install or if I want to restore using the last backup, I choose restore from backup. That gets me all of my appstore apps. I then download PkgBackup through Cydia. At that point, PkgBackup shows nothing to "restore." I then sync again with itunes, but I stll don't get my PkgBakcup restore entries. What am I doing wrong?