@thomasareed: it is a little bit off-topic, but Malwarebytes Anti-Malware for Mac is much slower than your original software was, is there a reason?
It shouldn't be slower than AdwareMedic used to be... in fact, it should be faster, as it's now written in native OS X code rather than with a rapid application development tool (Xojo) as AdwareMedic was. On all the Macs we're using for development and testing, scan times are around 5 seconds or less. (In fact, we've had some complaints from folks who think the software is broken, because it couldn't possibly be scanning that fast!
However, the signatures have grown significantly, and under certain uncommon conditions involving particularly cluttered folders that need to be scanned by new rules, it can take longer.
What kind of scan times are you seeing?