OK here we go:
From:
http://mobilesyrup.com/2015/09/22/iphone-6s-and-iphone-6s-plus-review/
But Apple did regress in one area: low-light performance. Because the 12 megapixel sensor in the new iPhones is roughly the same size as the 8 megapixel sensor in the previous versions, the pixels themselves are smaller (1.22 microns versus 1.5 microns). And despite reduced cross-talk between them, which purportedly lowers noise levels in low-light shots, it’s evident when comparing photos of the previous generation to this one that both of the newer models, the iPhone 6s especially, has to compensate by ratcheting up the light sensitivity, allowing grain and noise to creep in.
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iPhone 6s low light
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iPhone 6s Plus low light
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iPhone 6 low light
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iPhone 6 Plus low light
The differences are subtle, but it’s clear that the iPhone 6 Plus captures the best photo. Its optical image stabilization allows the shutter to stay open a quarter of a second, the same length as the iPhone 6s Plus, but the newer phone ramps up the light sensitivity to compensate for the reduced light available to its pixels, increasing the grain. The same thing can be seen between the iPhone 6 and iPhone 6s, though arguably the 6s takes a cleaner photo due to the improved noise handling through the A9’s updated image signal processor.
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Don't get me wrong. I'm sure the new sensor is "better." But the question is whether it's better in a meaningful way for the audience that Apple caters for? For FaceTime front camera, absolutely. For the rear camera for 4K, yes. For actual photography.. a small amount, and for low-light photography - unfortunately it looks like no. I personally would rather have kept an 8MP sensor but improved that low-light ability. But... the world does not revolve around me.