I purchased my Mid 2015 MacBookPro about a month ago. And I think I did face the problem.
I started having very strange and occasional/random delays when I moved some files around. For instance, when I moved a document from Folder A to Folder B the moved file facing the problem would appear in Folder B after a 1-2 sec. delay, AFTER the file had been removed from Folder A and regardless of the size of the file. Sometimes the files would just vanish in the process.
For example, I had to move a few PDFs from one folder to another. The files were wiped out from the source folder but only some of them ended up in the destination folder, albeit intact. A bunch of them simply vanished. I actually resolved this problem by pulling them back from my TM backup. But that incident did bother me and made me believe that something was wrong with my drive. I even ran a simple HD check on my drive to make sure it was ok but that did not reveal anything.
This file destruction happened to me only a few times. And most of the time the problem arose when I was moving the files to/from a 256bit encrypted disk image, rather than during the normal manipulation of the files. I have not faced any system failures yet and I am not sure if any other file got messed up or not. The delay problem was more frequent but it did not always corrupt/destroyed the data.
These problems disappeared after the update. I now wonder, however, if I need to go through a clean install or not...
Interesting, thanks for sharing!