I think you've got the heads mixed up, then. Besides the fact that Jobs is universally known as the man in black (turtlenecks), maybe Schmidt should be Jacob. Then the original quote, "Do you have any idea how badly I want to kill you" still fits.
In fact;
SCHMIDT: I take it you're here because of the Multi-Touch.
MAN IN BLACK: I am. How did they find my technology?
SCHMIDT: You'll have to ask them when they get here.
MAN IN BLACK: I don't have to ask. You gave it to them. Still trying to prove me wrong, aren't you?
SCHMIDT: You are wrong.
MAN IN BLACK: Am I? They copy. They fight. They destroy. They corrupt. It always ends the same.
SCHMIDT: It only ends once. Anything that happens before that is just progress.
MAN IN BLACK: Do you have any idea how badly I want to kill you?
SCHMIDT: Yes.
MAN IN BLACK: One of these days, sooner or later... I'm going to find a loophole, my friend.
SCHMIDT: Well, when you do, I'll be right here.