Dunno if this answers your question or not, but it's direct from
the Folding@Home FAQ:
Who “owns” the results? What will happen to them?
Folding@home is run by an academic institution (specifically the Pande Group, at
Stanford University’s
Chemistry Department), which is a nonprofit institution dedicated to science research and education. We will not sell the data or make any money from it. Moreover, we will make the data available for others to use. In particular, the results from Folding@home will be made available on several levels. Most importantly, analysis of the simulations will be submitted to scientific journals for publication, and these journal articles will be posted on the web page after publication.
Following the publications of these scientific articles, we will make the raw data of the folding runs available to other researchers upon request. The data sets from some of our most prominent simulations are already publicly available. We’ve also striven to share our key technologies with other scientists, to assist their research as well.
I'm running clients on Windows, but there's an option that says "Web Control" that appears in a contextual menu when I click on the system tray icon.