So I finally got around to trying this method but couldn't get it to work. I get to the stage where I need to boot from the EFI partition on the thunderbolt drive, but my computer just hangs when I select the EFI drive on the option+boot screen. For what it's worth, I accessed cmd through bootcamp using the Windows 10 technical preview (Virtualbox wouldn't see the thunderbolt drive).
Here's the partition layout as seen by disk utility in OS X:
Follow my instructions (it's in the post right above yours).