I doubt you have detailed characterization data on Apple's custom A chips. For all we know, some or all of these chips could run at much higher processor clock rates given lower impedance power sources (e.g. new or bigger batteries) than would fit in a style-competitive iPhone. At least for short periods, given thermal constraints.
At for thicker mobile phones, that's a consumer choice. I see almost nobody using those extra thick iPhone cases with an included battery. If very few consumers choose to carry more battery weight in their hand as an option, why should Apple foist that thickness and weight on every customer? I still occasionally carry my 5s because of its small size and low weight.
With an industrial UPS, I doubt the customers care much about the extra few pounds/kilos that the wasted battery capacity (e.g. above spec when new) costs.