Apple is still just as much vertically integrated on desktop computers as they are on phones and tablets. It's kinda their thing... Apple controls almost everything in their products end-to-end.
To review:
- Company A designs the hardware and the software. (Apple)
- Company B buys the processor from Company C and gets the OS from Company D. (other companies)
There's nothing wrong with the second method... sometimes that's all a company can do.
But Apple is firmly planted in the first method.
Well, on the OS X side, Apple is slightly less integrated than on the iOS side. They control the overall hardware and OS, but they still have to use whatever Intel, AMD and Nvidia give them. I think they would love to be able to get themselves out of that dependency, but realistically, they just can't anytime soon.
iOS is clearly how they would prefer to do things. Perhaps OS X will get there one day too.