Perhaps I don't understand what's being described. Is there a video out there showing this behavior?
Generally to see what folks are talking about on the rMBP:
Set resolution in System Prefs -> Display to Scaled, Looks like 1920x1200.
Open
http://www.theverge.com in Safari, scroll quickly top to bottom, then back to the top. The scrolling won't be totally smooth.
Open 10-15 Safari windows, activate Mission Control (or App Expose). The animation will be a bit choppy.
Same setup (10-15 Safari windows), exit Mission Control. Use Ctrl-Right to switch to Space #2. Then Ctrl-Left to switch back to Space #1. The animation will be a bit choppy.
And the most obvious to me: Drag your Applications folder onto the right side of the Dock, to make it a stack. In its options, set it to display as a list. Most likely you should be able to pop it up and it'll scroll off the top of the screen. Hover over the top of the list to scroll up, and notice how weirdly slow/choppy that action is.
This is all much more prevalent when on the integrated Intel HD4000, but still noticeable on the dedicated card (just not so much). Also much less noticeable at HiDPI 1440x900. A little less at HiDPI 1680x1050.
For comparison, download SetResX/Retina Display Manager (RDM) and set the resolution to non-HiDPI 1920x1200 or 1680x1050, then do the same tests. Particularly the stack scrolling.
(This all seems to implicate the HiDPI upscaling/downscaling mechanism as the culprit, particularly since non-HiDPI modes don't seem to experience this at all)
I've updated mine (2.7GHz, 16GB) to 10.8 DP4, and while things are definitely better (particularly in Safari), it's not gone. That having been said, it's not bothering me all that much, and it definitely seems like something that will continue to lessen with software optimizations.