What software are you going to be running? And through what kind of interface? I'm in the process of putting together an apartment-style recording studio as well. Gonna have to plan around these kids stomping around upstairs, but... Honestly, I'd try to find another spot to put it.... beside the desk or in a closet maybe? Closet seems like the best option honestly... Are you trying to use the closet as a booth or something? Or is it just too far away from where you're planning on having the desk?
I could care less what you do with the case. I'm not a fanboy, I'm just buying in for audio purposes... But think of this practically. Overheating can cause stability issues. I don't know if this is a personal studio or if you're having other musicians through, but the last thing you want is to be recording vocals for a track, and just as the vocalist gets 2/3 of the way through a perfect take, Protools crashes, taking that great take with it. I'm just saying. What happens if you do end up having stability issues? You'll have to take it out of the desk and just put it in the open or something... Possibly with sharp edges where you cut? Could be cable shredders...
But it's your computer. Do with it as you will...
I could care less what you do with the case. I'm not a fanboy, I'm just buying in for audio purposes... But think of this practically. Overheating can cause stability issues. I don't know if this is a personal studio or if you're having other musicians through, but the last thing you want is to be recording vocals for a track, and just as the vocalist gets 2/3 of the way through a perfect take, Protools crashes, taking that great take with it. I'm just saying. What happens if you do end up having stability issues? You'll have to take it out of the desk and just put it in the open or something... Possibly with sharp edges where you cut? Could be cable shredders...
But it's your computer. Do with it as you will...